1. The origin of the first life is largely irrelevant to evolution per se. There are several proposed mechanisms for abiogenesis that might account for this, and we know from experiment that primordial conditions could have spontaneously given rise to all of the amino acids that currently make up carbon-based life. In the end, whether you accept science or propose that life has a magical origin, abiogenesis occurred at some point, and biological evolution followed.
2. Every single living organism is a "partially evolved intermediate creature," though I suspect most biologists would consider the phrase "partially evolved" nonsensical.
3. First of all, broken glass particles don't randomly break and move apart. They do so according to the laws of motion. With enough data and a precise application of force, you could predict exactly how many shards would be produced and where they would land. Secondly, our planet is an open system. You misunderstand entropy and thermodynamics.
4. With a sample size of a trillion universes, we would expected to find life only in those conducive to its formation. In the same way, we would expect to find a body of water with a specific shape only in a container that allows that shape. It isn't coincidence; it's inevitable.
5. Nothing about the standard model posits "nothingness," but perhaps the answer to your question can be found in quantum vacuum fluctuations.
http://en.wikipedia.org/wiki/Quantum_fluctuation
http://www.infidels.org/library/modern/mark_vuletic/vacuum.html
If you're going to ask this question of atheists, then you should also ask it of yourself. The problem applies even more so to theists, because your only way out is to answer, "God did it," which is just a painfully unsatisfactory cop-out. At least quantum fluctuations are observed.
> "not so nice to see arrogance and personal insults for posing legitimate questions. Why get so defensive? Do you feel threatened?" <
No, but these sorts of insipid questions are veritable dead horses that are asked all the time. If you really don't know the answers, then clearly you haven't looked very hard. This stuff is right up there with, "If we came from monkeys, then why are there still monkeys?"
> "Yes we have differences in opinion which we must agree to disagree on but cant we have a civilized dialogue without being branded "deluded" or "close minded"." <
Just climb down off your holy high horse.
> "Secondly cant athiests even accept the possibility of a creator?" <
Sure. Can you accept the possibility that there isn't one?
> "I mean, about something which you hardly know anything about, you have already declared to yourself there can be no creator and you will never beleive in one." <
I never declared anything of the sort. I don't believe in creator gods because 1) there is no evidence of such beings, and 2) they violate the metaphysical subject-object relationship. A subject, by definition, is conscious of something. Existence is irreducible.
> "There are some incredible things we do not know about yet in the universe that we could not begin to imagine, things that defy our understanding of physics.Yet we cannot just deny it completely and say it can never exist." <
Just because our understanding of reality is incomplete, that doesn't mean we have to invoke magic. Again, if you've been at this for any time at all, you should know that the "god of the gaps" appeal is fallacious.
> "So is complete rejection of a creator good logic or just arrogance and hatred of religion?" <
It is sound reasoning to demand evidence for claims and to not explain unknowns away with magic. I do think religion is a blight on humanity, but I frankly don't care if you choose to engage in worship, rituals or whatever else your invisible master/mistress allegedly demands of you through human proxies.